PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla007467
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 194aa    MW: 21486.5 Da    PI: 4.4491
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla007467genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182069255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  Cla007467 20 KYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDKPEKAARAFDAAQFCLRG 69
               8*****999.**********933...5*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.38E-282079No hitNo description
SMARTSM003802.3E-312083IPR001471AP2/ERF domain
PROSITE profilePS5103221.6142077IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-292079IPR001471AP2/ERF domain
PfamPF008471.1E-112069IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-202079IPR016177DNA-binding domain
PRINTSPR003671.4E-82132IPR001471AP2/ERF domain
PRINTSPR003671.4E-84359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MADRHNSGRE TEYKSGQNLK YKGVRKRKWG KWVSEIRLPN SRDRIWLGSY DKPEKAARAF  60
DAAQFCLRGP HAKLNFPDSP PVIDGGDRLS AQEIQAAAAK YAEEQGRDGV GEDGYSNEND  120
EVVAVEGGDG DGGWPVWDMF DGASEFGFGN IMGGNGMIYD GDITFQVQED MEECGDGGGY  180
FCHEANFLWN FGNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127KGVRKRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818612e-95LN681861.1 Cucumis melo genomic scaffold, anchoredscaffold00029.
GenBankLN7132612e-95LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008452799.13e-87PREDICTED: ethylene-responsive transcription factor ERF017-like
SwissprotQ84QC28e-46ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLA0A0A0L4625e-82A0A0A0L462_CUCSA; Uncharacterized protein
STRINGPOPTR_0018s08320.13e-45(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-39ERF family protein